Work With Us
Accelerating Discovery through Spatial Innovation
How to work with us
Work closely with our experienced scientists to ensure your project’s success.
Share your tissue + biological question
Tell us your tissue type, assay of interest, and what you want to learn. We’ll recommend the best path.
De-risk with AtlasVerify (optional)
A high-throughput qualification step that helps predict spatial performance before committing precious samples.
Choose your service level
Pick White Glove, Standard, or Kit depending on how hands-on you want to be.
Get raw data, processed outputs, or insights
Receive deliverables tailored to your workflow—files only, processed matrices, and/or interactive analysis.
Choose the workflow that fits your lab
Whether you want hands-on partnership, just the data, or full in-lab control — pick the service level that matches your team.
White Glove Service
Ideal when you want AtlasXomics to own the workflow end-to-end and deliver insights, not just files.
- Send tissue sections
- We run assay + sequencing
- Analysis + interactive exploration
Standard Service
Best if you want AtlasXomics to generate high-quality data fast, and your team will take analysis from there.
- Send tissue sections
- We run assay + sequencing
- You analyze the data
Kit
Run the workflow in your lab with reusable hardware plus consumables — designed for standard lab setups.
- Reusable hardware + consumables
- Runs in standard labs
- Full control + scale on demand
Explore your data — then pick the analysis path that fits your team
Receive processed outputs for your own pipeline, or use the AtlasXomics Cloud Solution to go from FASTQs to interactive visualization and pathology-guided comparisons in one workspace.
DIY Data Analysis
Full control for experienced analysts.
- Processed outputs delivered directly to you
- Built around open-source packages (e.g., Seurat and ArchR)
- Analyze locally or within your own infrastructure
- Ideal for teams with in-house bioinformatics expertise
AtlasXomics Cloud Solution
Data analysis without coding.
- End-to-end workflows from FASTQs to interactive visualization
- Built-in QC, filtering, and clustering optimization
- Automated peak calling, motif enrichment, and differential analysis
- Spatial visualization + advanced downstream spatial analyses
AtlasXomics portal workflow
Explore QC and processed outputs, annotate clusters, and align spatial maps with tissue pathology — all in a secure cloud workspace.
Explore your data
Load files, review QC, and generate outputs ready for collaboration.
- Standard processing + QC review
- Spot-level metrics and filters
- Exports for downstream analysis
Annotate your clusters
Label clusters, compare populations, and map cell states spatially.
- Cluster annotation via gene activity
- Side-by-side population comparisons
- Motif and accessibility analysis
Integrate tissue pathology
Align H&E with spatial maps and run ROI-based comparisons.
- Overlay H&E and spatial features
- ROI-based spatial comparisons
- Link morphology to regulation
Contact Our Experts
We are actively working with academia and industry to create multi-omic maps of tissues. If you are interested in our service or early-access kits contact us by this form or email info@atlasxomics.com.
We are always interested in partnering to adapt our technology to other applications. If you are interested in a partnership with AtlasXomics, contact us at info@atlasxomics.com.
Need a letter of support for a grant? We’re happy to supply technical details, budgeting guidance, and formal letters to strengthen your proposal—just email us!
AtlasXomics Inc.
C/O John B. Pierce Laboratory
290 Congress Ave.
New Haven, CT 06519-1403