Map chromatin across intact tissue at spatial resolution
AtlasXomics delivers spatial ATAC-seq, CUT&Tag, and multi-modal epigenomic profiling — no custom instruments required. Compatible with fresh-frozen and FFPE tissue.
How to work with us
Send us your samples
AtlasXomics runs the full workflow — from sample qualification through sequencing and data analysis. Choose how much support you need.
Run it in your lab
Integrate our FlowGel kits directly into your existing workflows. No custom instruments — just a standard microscope and the AtlasXpress accessory.
One protocol across all modalities:
Choose your assay
Compare all assays →Spatial ATAC-seq
Map open chromatin across tissue to identify regulatory programs and cell-type-specific accessibility.
Spatial CUT&Tag
Profile histone modifications (H3K27me3, H3K4me3, and others) with spatial context across intact tissue sections.
Spatial Multi-omics
Simultaneously profile chromatin accessibility and DNA methylation, or combine ATAC with spatial gene expression.
AtlasVerify
De-risk your samples before committing to a full spatial assay.
We run an in-situ bulk qualification assay on an adjacent section, generate an NGS library, and give you a formal go/no-go recommendation — so you only proceed when the data supports it.
Ship slides
5–10 µm sections on standard 1×3" slides
In-situ QC
Bulk qualification + shallow sequencing
Go / no-go
Formal recommendation before you commit
End-to-end workflow
Sample prep
FF or FFPE tissue on standard slides
AtlasVerify QC
Optional bulk qualification + go/no-go
Spatial profiling
DBiT-seq / FlowGel barcoding + library prep
Sequencing
Shallow QC checkpoint, then deep sequencing
Analysis & delivery
Cloud portal, DIY outputs, or expert reporting
Ready to start your project?
Talk to a scientist — we'll help you figure out the right assay, service level, and whether your samples are ready.