Knowledge Center

All the know‑how in one place—protocols, datasets, papers, and videos to help you design, run, and publish your AtlasXomics experiments

Publication AtlasXomics Inc Publication AtlasXomics Inc

BioRxiv

JianXing’s team presents Spatial-DMT, a method for co-mapping DNA methylation and gene expression in tissue sections at near single-cell resolution. It reveals spatially coordinated epigenetic regulation during mouse development.

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Publication AtlasXomics Inc Publication AtlasXomics Inc

BioRxiv

The Gallo lab used spatial ATAC-seq at 25 µm resolution, combined with spatial multi-omics and snATAC on 28 IDH-wild-type glioblastoma resections, to reveal a consistent layout where small SOX10-high oligodendrocyte-progenitor-like “islands” are nested within broader VEGFA-high mesenchymal-like sheets in 27 of 28 tumours.

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Publication AtlasXomics Inc Publication AtlasXomics Inc

Nature Communications

The Deng Lab finds Spatial FFPE-ATAC-seq shows that chromatin accessibility mapping in archived FFPE blocks is finally feasible—signaling the next frontier for spatial epigenomics

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Publication AtlasXomics Inc Publication AtlasXomics Inc

BioRxiv

Dr. Chi-Ming Li’s built 20 µm-pixel chromatin maps of IL-2-treated mouse spleen and lung, pinpointing activated regulatory T-cell niches and showing BATF/BACH1 bZIP motifs opening

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Publication AtlasXomics Inc Publication AtlasXomics Inc

BioRxiv

Spatial profiling of chromatin accessibility reveals alteration of glial cells in Alzheimer’s disease mouse brain using Spatial ATAC-Seq

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